Valik vanemaid teaduspublikatsioone 2005-2013
2013
Keis M, Remm J, Ho SYW, Davison J, Tammeleht E, Tumanov IL, Saveljev AP, Männil P, Kojola I, Abramov AV, Margus T, Saarma U. 2013. Complete mitochondrial genomes and a novel spatial genetic method reveal cryptic phylogeographic structure and migration patterns among brown bears in north-western Eurasia. Journal of Biogeography, 40: 915–927. http://dx.doi.org/10.1111/jbi.12043
Hindrikson M, Remm J, Männil P, Ozolins J, Tammeleht E, Saarma U. 2013. Spatial genetic analyses reveal cryptic population structure and migration patterns in a continuously harvested grey wolf (Canis lupus) population in north-eastern Europe. PLoS ONE 8(9): e75765. doi:10.1371/journal.pone.0075765
Boubaker G, Macchiaroli N, Prada L, Cucher MA, Rosenzvit MC, Ziadinov I, Deplazes P, Saarma U, Babba H, Gottstein B, Spiliotis M. 2013. A Multiplex PCR for the Simultaneous Detection and Genotyping of the Echinococcus granulosus Complex. PLoS Neglected Tropical Diseases, 7(1): e2017. doi:10.1371/journal.pntd.0002017
Andresiuk MV, Ponce Gordo F, Saarma M, Elissondo MC, Taraborelli A, Casalongue C, Denegri G, Saarma U. 2013. Echinococcus granulosus genotype G1 dominated in cattle and sheep during 2003-2006 in Buenos Aires province, an endemic area for cystic echinococcosis in Argentina. Acta Tropica, 127: 136–142. doi: 10.1016/j.actatropica.2013.04.008
2012
Hindrikson M, Männil P, Ozolins J, Krzywinski A, Saarma U. 2012. Bucking the trend in wolf-dog hybridization: first evidence from Europe of hybridization between female dogs and male wolves. PLoS ONE 7(10): e46465. doi:10.1371/journal.pone.0046465
2011
Davison J, Ho SYW, Bray S, Korsten M, Tammeleht E, Hindrikson M, Østbye K, Østbye E, Lauritzen S-E, Austin J, Cooper A, Saarma U. 2011. Late-Quaternary biogeographic scenarios for the brown bear (Ursus arctos), a wild mammal model species. Quaternary Science Reviews, 30: 418-430. doi:10.1016/j.quascirev.2010.11.023
Li M-H, Kantanen J, Michelson A, Saarma U. 2011. Genetic components of grey cattle in Estonia as revealed by microsatellite analysis using two Bayesian clustering methods. BMC Research Notes 4: 37. http://dx.doi.org/10.1186/1756-0500-4-37
Soon V, Saarma U. 2011. Mitochondrial phylogeny of Chrysis ignita (Hymenoptera: Chrysididae) species group based on simultaneous Bayesian alignment and phylogeny reconstruction. Molecular Phylogenetics and Evolution, 60: 13-20. http://dx.doi.org/10.1016/j.ympev.2011.04.005
Knapp J, Nakao M, Yanagida T, Okamoto M, Saarma U, Lavikainen A, Ito A. 2011. Phylogenetic relationships within Echinococcus and Taenia tapeworms (Cestoda: Taeniidae): an inference from nuclear protein-coding genes. Molecular Phylogenetics and Evolution, 61: 628-638. doi:10.1016/j.ympev.2011.07.022
Remm J, Lõhmus A. 2011. Tree cavities in forests - the broad distribution pattern of a keystone structure for biodiversity. Forest Ecology and Management, 262(4): 579 - 585. doi:10.1016/j.foreco.2011.04.028
2010
Tammeleht E, Remm J, Korsten M, Davison J, Tumanov I, Saveljev A, Männil P, Kojola I and Saarma U. 2010. Genetic structure in large, continuous mammal populations: the example of brown bears in northwestern Eurasia. Molecular Ecology, 19: 5359–5370. http://dx.doi.org/10.1111/j.1365-294X.2010.04885.x
2009
Saarma U, Jõgisalu I, Moks E, Varcasia A, Lavikainen A, Oksanen A, Simsek S, Andresiuk V, Denegri G, Gonzalez LM, Ferrer E, Garate T, Rinaldi L, Maravilla P. 2009. A novel phylogeny for the genus Echinococcus based on nuclear data challenges relationships based on mitochondrial evidence. Parasitology, 136: 317-328. http://dx.doi.org/10.1017/S0031182008005453
Korsten M, Ho SYW, Davison J, Pähn B, Vulla E, Roht M, Tumanov IL, Kojola I, Andersone-Lilley Z, Ozolins J, Pilot M, Mertzanis Y, Giannakopoulos A, Vorobiev AA, Markov NI, Saveljev AP, Lyapunova EA, Abramov AV, Männil P, Valdmann H, Pazetnov SV, Pazetnov VS, Rõkov A, Saarma U. 2009. Sudden expansion of a single brown bear lineage in northern continental Eurasia: a general model for mammals after the last ice age? Molecular Ecology, 18: 1963-1979. http://dx.doi.org/10.1111/j.1365-294X.2009.04163.x
Vulla E, Hobson KA, Korsten M, Leht M, Martin A-J, Lind A, Männil P, Valdmann H, Saarma U. 2009. Carnivory is positively correlated with latitude among omnivorous mammals: evidence from brown bears, badgers and pine martens. Annales Zoologici Fennici, 46: 395–415. http://www.sekj.org/PDF/anzf46/anzf46-395.pdf
Chessa B, Pereira F, Arnaud F, Amorim A, Goyache F, Mainland I, Kao R, Pemberton J, Beraldi D, Stear M, Alberti A, Pittau M, Iannuzzi L, Banabazi M, Kazwala R, Zhang Y, Arranz JJ, Ali B, Wang Z, Uzun M, Dione M, Olsaker I, Holm, L-E, Saarma U, Ahmad S, Marzanov N, Eythorsdottir E, Holland M, Ajmone-Marsan P, Bruford M, Kantanen J, Spencer T, Palmarini M. 2009. Revealing the History of Sheep Domestication Using Retrovirus Integrations. Science, 324: 532-536. http://dx.doi.org/10.1126/science.1170587
2008
Moks E, Jõgisalu I, Valdmann H, Saarma U. 2008. First report of Echinococcus granulosus G8 in Eurasia and a reappraisal of the phylogenetic relationships of “genotypes” G5-G10. Parasitology, 135: 647-654. http://dx.doi.org/10.1017/S0031182008004198
Ho SYW, Saarma U, Barnett R, Haile J, Shapiro B. 2008. The Effect of Inappropriate Calibration: Three Case Studies in Molecular Ecology. PLoS ONE, 3(2): e1615 doi:10.1371/journal.pone.0001615
Õunap E, Viidalepp J, Saarma U. 2008. Systematic position of Lythriini revised: transferred from Larentiinae to Sterrhinae (Lepidoptera, Geometridae). Zoologica Scripta, 405-413. http://dx.doi.org/10.1111/j.1463-6409.2008.00327.x
Remm J, Lõhmus A, Rosenvald R. 2008. Density and diversity of hole-nesting passerines: dependence on the characteristics of cavities. Acta Ornithologica, 43(1): 83-91. http://dx.doi.org/10.3161/000164508X345365
2007
Saarma U, Ho SYW, Pybus OG, Kaljuste M, Tumanov IL, Kojola I, Vorobiev AA, Markov NI, Saveljev AP, Valdmann H, Lyapunova EA, Abramov AV, Männil P, Korsten M, Vulla E, Pazetnov SV, Pazetnov VS, Putchkovskiy SV, Rõkov AM. 2007. Mitogenetic structure of brown bears (Ursus arctos L.) in north-eastern Europe and a new time-frame for the formation of European brown bear lineages. Molecular Ecology, 16: 401-413. http://dx.doi.org/10.1111/j.1365-294X.2006.03130.x
Saarma U, Kojola I. 2007. Matrilineal genetic structure of the brown bear population in Finland. Ursus, 18(1): 30-37. http://dx.doi.org/10.2192/1537-6176(2007)18[30:MGSOTB]2.0.CO;2
Järvis T, Kapel Ch, Moks E, Talvik H, Mägi E. 2007. Helminths of wild boar in the isolated population close to the northern border of its habitat area. Veterinary Parasitology, 150(4): 366-369. http://dx.doi.org/10.1016/j.vetpar.2007.09.015
2006
Moks E, Jõgisalu I, Saarma U, Talvik H, Järvis T and Valdmann H. 2006. Helminthological survey of wolf (Canis lupus) in Estonia, with an emphasis on the occurrence of Echinococcus granulosus. Journal of Wildlife Diseases, 42(2): 359-365. http://dx.doi.org/10.7589/0090-3558-42.2.359
Saarma U, Tumanov I. L. 2006. Phylogenetic evaluation of three subspecies from the Mustela nivalis group. Zoological Studies, 45(3):435-442. http://zoolstud.sinica.edu.tw/Journals/45.3/435.pdf
Talvik H, Moks E, Mägi E, Järvis T, Miller I. 2006. Distribution of Toxocara infection in the environment and in definitive and paratenic hosts in Estonia. Acta Veterinaria Hungarica, 54(3): 399-406. http://dx.doi.org/10.1556/AVet.54.2006.3.10
Remm J, Lõhmus A, Remm K. 2006. Tree cavities in riverine forests: What determines their occurrence and use by hole-nesting passerines? Forest Ecology and Management, 221(1-3): 267-277. http://dx.doi.org/10.1016/j.foreco.2005.10.015
2005
Moks E, Saarma U, Valdmann H. 2005. Echinococcus multilocularis in Estonia. Emerging Infectious Diseases, 11: 1973-1974. http://dx.doi.org/10.3201/eid1112.050339
Valdmann H, Andersone Z, Koppa O, Ozolins J, Bagrade G. 2005. Analyses of winter diets of wolf Canis lupus and lynx Lynx lynx in Estonia and Latvia. Acta Theriologica, 50(4): 521-527. http://dx.doi.org/10.1007/BF03192645
Talvik H, Sudhaus W, Moks E, Liivla G, Krall E. 2005. The saprobiotic nematode Pelodera strongyloides dermatitica (Rhabditida : Rhabditidae) as a cause of dermatitis in Labrador retriever. Russian Journal of Nematology, 13: 131-135. http://www.russjnematology.com/rjnvol132.htm#Tal
Õunap E, Viidalepp J, Saarma U. 2005. Phylogenetic evaluation of the taxonomic status of Timandra griseata and T. comae (Lepidoptera: Geometridae, Sterrhinae). European Journal of Entomology, 102: 607-615. http://dx.doi.org/10.14411/eje.2005.085
Lõhmus A, Remm J. 2005. Nest quality limits the number of hole-nesting passerines in their natural cavity-rich habitat. Acta Oecologica - International Journal of Ecology, 27: 125-128. http://dx.doi.org/10.1016/j.actao.2004.11.001
Lõhmus A, Lõhmus P, Remm J, Vellak K. 2005. Old-growth structural elements in a strict reserve and commercial forest landscape in Estonia. Forest Ecology and Management, 216: 201-215. http://dx.doi.org/10.1016/j.foreco.2005.05.031